openalea.phenomenal.segmentation

3D Segmentation

Skeletonization

graph

image_3d_routines

_skeleton_octree

This module is actually deprecated

skeleton_phenomenal

skeleton_thinning

A 3D 6-subiteration thinning algorithm for extracting medial lines of Kalman Palagyi and Attila Kuba implementation

Maize Segmentation

peak_detection(values[, order])

plane_interception

maize_segmentation(voxel_skeleton, graph[, ...])

Labeling segments in voxel_skeleton into 4 label.

maize_stem_detection

maize_analysis(maize_segmented)

Update info fiel of the VoxelSegmentation object with the analysis result computed.

Modules

openalea.phenomenal.segmentation.graph

openalea.phenomenal.segmentation.image_3d_routines

openalea.phenomenal.segmentation.maize_analysis(...)

Update info fiel of the VoxelSegmentation object with the analysis result computed.

openalea.phenomenal.segmentation.maize_segmentation(...)

Labeling segments in voxel_skeleton into 4 label.

openalea.phenomenal.segmentation.maize_stem_detection

openalea.phenomenal.segmentation.peak_detection(values)

openalea.phenomenal.segmentation.plane_interception

openalea.phenomenal.segmentation.skeleton_phenomenal

openalea.phenomenal.segmentation.skeleton_thinning

A 3D 6-subiteration thinning algorithm for extracting medial lines of Kalman Palagyi and Attila Kuba implementation